Proton exchange membrane for direct methanol fuel cell was developed by the incorporation of silicotungstic acid supported on silica (SiO2-SiWA) into SPEEK polymer. The properties of composite membranes with various silica/SiWA ratios were investigated and compared in this study. It was found that high silica to SiWA weight ratio (2:1) resulted in porous membrane with high proton conductivity and moderate methanol permeability. Reduction in the aforementioned ratio to 1:1 resulted in a more compact structure with better thermal stability, however, leaching of SiWA from the membrane occurred due to insufficient support. SPEEK membrane incorporated with 10 wt% SiO2 and 5 wt% SiWA showed the highest selectivity of 6.44 × 104 S.s/cm3 and performed better than that of the pure SPEEK membrane. These results suggested that these membranes have potential to be considered for DMFCs applications.